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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900618.1_cds_XP_016450618.1_45052
CDS Infomation

[gene=LOC107775406] [db_xref=GeneID:107775406] [protein=poly(A)-specific ribonuclease PARN-like isoform X2] [protein_id=XP_016450618.1] [location=complement(join(102452..103101,103622..103837,103929..104043,104126..104239,104489..104601,104680..104868,105081..105211,106231..106565))] [gbkey=CDS]
Sequence

ATGTTACAGAGGCGCTTGTTTTGCACGAGGATTTCGAAAACCATTTTCCAATCAAACCCC
GGACATAACCAGAGCAAATGGAGTGTAAAGCAAGTTTCAAAGTCCAATTTCTCAGCGGCA
TTAGAAGAGATAAGTACTTTCATCTCCGACTCTGATTTCATCGCCGTCTCATTGAAGAAT
ACTGGGGCCTACTCTGCACCCTGGCAGCGTATTCTGCCAATTGACACCGCACACACCGCC
TATCTCAAAGCCAAATACGCCGCTGAACGGTTTCAGGTCCTTCAGTTCGCCGTTTGCCCT
TTCTCCATTAGAGGTTCCAAGCTCATCGTTCACCCATACAACTTTCATTTGTTCCCTCGT
GATGAGTTAAAAATAGGGATGCCTTCTTATAGTTTCTCTTGTCAATCATCATATTTGACC
TCTATGGCTCGAGAAGGTTTTGATTTCAATGCCTGCATATATGATGGCATATCATATTTA
TCCAGATCGCAAGAATCAGCTGCAATAGATAGAATTGGAAATGCATCACATATTACCTGT
ACAGTGCAATCTCCATCAGGGCATACAGTTGCTGATTCCGTATTTGCAGAGAGGATCAAA
TCTCGACTTAAGCGTTGGATAAGTGCTTGCAGAGACACCAACAAGAAGCCTGAAGATGCT
TTAATCAGTTCCTTGAGAAAAATTGTCTCGGGAGATGAAGTATATGGATCCAGACCATGC
TTGAGCATAGATGTATGCAGTGAACGTCAAGTGCACCTTGTGTTGGAGACACTGAAGGAT
TTTGTTGATGTCATACCTTTACTAACCCCAGCAAAGGGAGGGACGACAATGTCTGTTCGA
GTTGTTTTGACAAGTTCAGAAGAAGACAAGATTCTTTTACAGAAGGAACTTCAAAATGAG
GAGAAGGAGCATAATAAGCGCATTCGTGGCTTTCGAGAGGTGATCGATTTGATTTCCGCT
TCTCAGAAACCCGTTGTTGCCCACAACTCTCTTAATGATTTTACCTTTGTCCATTCCAAG
TTCTTAGCTCCATTGCCATCAACGCTGGATGAATTCAAAAGTTCATTATGTGAGGTCCTC
CCAAATGTACTTGATGTCAACCATCTTATGAAGGAAATCAGCCCTCTGAAAAAAGTGAAC
AATTTGCCTGCAAGTATCTCATATTTGAAACAAAGATTTTTTGCCCCTATTGATATGGAG
ATATCTAACCAAGCTGAGGCCACGGAAGTGAAGACTCTTGGACATGATGTTTTGAAGATA
AGCGAATTGTTTGCGAAGCTGTACTCCATACTAAGAATTGCACCAAAAGCTCCTGAAGCT
GCTGAGGGCCATTTGCCTGATGCAATTGAATGCTACTTAAACTTGTTCAACCCTTGCTTT
GCCAGTTCTCATGGTCTTGCTGATGAAGGTGTTAGTGTGTGGACTGATAGTACTAGAAAA
ATTAGTATTAAGAATCTAGTTTTCCTATGGGGATTCAGGGGTGGGACATCTGCAGGACAG
CTGAAAAGCCTCCTACATGGTTCACATGAAGTTCTCCATAATGAATTTGATGTTAGGCTA
GTGGATAAAAGTTGTGCTGTAGTTGTTTTTGGGAACCCTGGCTTTTCGGAAGTCCTGTTG
CAGCTAATGGATTCTGGAGGTATCTGTACTAGTATCCTGAAGGAGATGCTGGCAGACGGC
CTGACAGCCGCAGGTTATGAGGCGTACCAAAAAGTCTGTGAGTTAGGTCTATGGGAAGCA
GATTTGGCCAGTTCATTCGAAAGGGCTTTGGAAGAAAATGATAGCTTCTCAGAAGCTCAC
TCACAGGAGCTTCCAGGGATATGTTGGAATAATGATGAAATGATTAACCTGGATGACCTT
TAA

Peptide Sequence

PEP ID

XP_016450618.1
PEP Infomation

PREDICTED: poly(A)-specific ribonuclease PARN-like isoform X2 [Nicotiana tabacum]
Sequence

MLQRRLFCTRISKTIFQSNPGHNQSKWSVKQVSKSNFSAALEEISTFISDSDFIAVSLKN
TGAYSAPWQRILPIDTAHTAYLKAKYAAERFQVLQFAVCPFSIRGSKLIVHPYNFHLFPR
DELKIGMPSYSFSCQSSYLTSMAREGFDFNACIYDGISYLSRSQESAAIDRIGNASHITC
TVQSPSGHTVADSVFAERIKSRLKRWISACRDTNKKPEDALISSLRKIVSGDEVYGSRPC
LSIDVCSERQVHLVLETLKDFVDVIPLLTPAKGGTTMSVRVVLTSSEEDKILLQKELQNE
EKEHNKRIRGFREVIDLISASQKPVVAHNSLNDFTFVHSKFLAPLPSTLDEFKSSLCEVL
PNVLDVNHLMKEISPLKKVNNLPASISYLKQRFFAPIDMEISNQAEATEVKTLGHDVLKI
SELFAKLYSILRIAPKAPEAAEGHLPDAIECYLNLFNPCFASSHGLADEGVSVWTDSTRK
ISIKNLVFLWGFRGGTSAGQLKSLLHGSHEVLHNEFDVRLVDKSCAVVVFGNPGFSEVLL
QLMDSGGICTSILKEMLADGLTAAGYEAYQKVCELGLWEADLASSFERALEENDSFSEAH
SQELPGICWNNDEMINLDDL

Transcript Sequence

Gene sequence data has not been registered.